A2Uploader Issues

Hey everyone,
I was having a few problems with A2Uploader. My computer has McAfee installed in it. Everytime I use A2Uploader, McAfee closes it and deletes A2Uploader, even when I'm in the middle of flashing (I had filesystem opened with my c905 and McAfee just killed A2Uploader and I didn't get a chance to press "Shutdown FS Manager" or "Stop" or "Quit", did this damage my phone? and also many other McAfee killed A2Uploader while I was using it with my C905, would this damage my phone? What do I have to do then (to fix the damage maybe?)? Or is this okay and nothing bad happened at all?)
I have McAfee Internet Security installed and it does not have any exclusion list to put A2Uploader in and there is NO POSSIBLE WAY to stop McAfee from running. It was just designed hat way. Even if I try to disable it from running at startup, it won't work. Uninstalling McAfee isn't an option for me. So McAfee has no exclusion list and it has no way to stop it. How do I use A2Uploader? It keeps getting killed by McAfee. How do I use A2Uploader? Is there any alternative to A2Uploader I can use? How do I Use A2Uploader?

and another quick question.. I used A2Uploader (I used Identify) (And McAfee didn't kill it this time, I got lucky I guess, I did my whole work without McAfee killing A2Uploader and got out myself), then I disconnected my phone and took out the battery, then I put the battery in and didn't turn on my phone and used it with Omnius (I used Identify)...
Is this okay? I didn't turn on my phone after I used A2Uploader, is that okay? I used A2Uploader and then just removed and reinserted the battery and used Ominus without turning on the phone between.. Am I supposed to turn my phone on between (after using A2Uploader?) I just removed and reinserted the battery but didn't turn my phone on in between, is this okay?

Thank You Very Much